BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D12LP1|AL427902
(524 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 961 0.0
>3x_Contig1450
Length = 9648
Score = 961 bits (478), Expect = 0.0
Identities = 505/519 (97%), Gaps = 1/519 (0%)
Strand = Plus / Plus
Query: 6 accacttccaggggctccttagaggaaaagttagtctgggctttccaacvctatgattta 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6111 accacttccaggggctccttagaggaaaagttagtctgggctttccaactctatgattta 6170
Query: 66 maccacgtatggcgtaatttcatatgaagaaatgttgaccatagtgtcaagtatttataa 125
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6171 aaccacg-atggcgtaatttcatatgaagaaatgttgaccatagtgtcaagtatttataa 6229
Query: 126 vatgatcggcsncatggtaaaactaagtgacgatgaagctactccagagttaagggtaga 185
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6230 aatgatcgggaacatggtaaaactaagtgacgatgaagctactccagagttaagggtaga 6289
Query: 186 aaagatctttaggcttatggataaagacaaagatggttgtattacgttagatgaatttag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6290 aaagatctttaggcttatggataaagacaaagatggttgtattacgttagatgaatttag 6349
Query: 246 agacggatcgamggtcgatccatctatagtaggggcattgaatctttatgatggattggt 305
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6350 agacggatcgaaggtcgatccatctatagtaggggcattgaatctttatgatggattggt 6409
Query: 306 atgacccttgtgtaacctgcttccatacaacttacttagtgtaagttttcaacggttgca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6410 atgacccttgtgtaacctgcttccatacaacttacttagtgtaagttttcaacggttgca 6469
Query: 366 cggcaattaggcgggggcactttttttggcttgamgttgttagtcttammgtcatattcm 425
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 6470 cggcaattaggcgggggcactttttttggcttgaagttgttagtcttaaagtcatattca 6529
Query: 426 tmctgactgtttcttttaatgtgctcttttttgataatggagcatgcggttctcttcctg 485
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6530 tactgactgtttcttttaatgtgctcttttttgataatggagcatgcggttctcttcctg 6589
Query: 486 amacattgatttacgttagtttccaacgtgtatgggtgt 524
| |||||||||||||||||||||||||||||||||||||
Sbjct: 6590 aaacattgatttacgttagtttccaacgtgtatgggtgt 6628
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2872
Number of Sequences: 1807
Number of extensions: 2872
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 524
length of database: 10,358,551
effective HSP length: 16
effective length of query: 508
effective length of database: 10,329,639
effective search space: 5247456612
effective search space used: 5247456612
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)